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Kevin Blighe
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Answer: Annotation for EPICv2
by
icecreamlover
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Hello, I am also working on analyzing my data from EPICv2 using ChAMP. I used this resource as a guide: https://github.com/YuanTian1991/ChA…
Comment: Combining RNAseq and microarray data using edgeR/limma-voom
by
James W. MacDonald
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And it doesn't matter if you're doing gene set analyses after, if the statistics are questionable to begin with.
Comment: Combining RNAseq and microarray data using edgeR/limma-voom
by
James W. MacDonald
67k
If you're saying that (as an example) you have treated and control in both assay types, and you want to combine and make comparisons betwee…
Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
by
Guido Hooiveld
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4.1k
I have contacted NCBI, and meanwhile got an an answer. See below.
It turns out that the official, HGNC-approved symbols are present in the…
Comment: Question about using LRT test for time course experiments with DESeq2
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Denise
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Not really, we are testing some toxic compounds to identify genes that are activated in response to the toxic exposure. Genes that change o…
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